![]() With different selections, coloring schemes, and rendering methods.įor example, the protein backbone can be drawn as a smooth tube in one Other lighting and shading characteristics used when rendering the molecule.Ī molecule can contain any number of different representations, andĬomplex pictures of the molecule can be generated by creating views A material, which determines the shininess, opacity, and.Section 6.2 describes VMD's coloring methods. Set the coloring method at the right of the window. A coloring method, which determines how to color each of theĪtoms and bonds included in the view.A drawing method (representation style),Ītoms, bonds, and other components of the molecule.ĭescribes the rendering methods available in VMD.Section 6.3 describes the syntax used to select atoms. ![]() When drawing volumetric data such as an electron density map, ![]() Input field at the bottom of the Graphics window. An atom selection, which determines which of the atoms in the.Next: Rendering methods Up: VMD User's Guide Previous: RamaPlot Contents IndexĮach molecule in VMD is drawn as a collection of severalĪ representation is just one particular way of drawing the molecule,
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